BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F05LP1|AL430415
(854 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1495 669 0.0
>3x_Contig1495
Length = 10008
Score = 669 bits (334), Expect = 0.0
Identities = 513/580 (88%)
Strand = Plus / Plus
Query: 275 agagtgataagaagaaagaggaggtaaaaagggaagtgttggagaatgaattgttgaaaa 334
||||||||||||||||||||||||| ||||| |||||||| |||||||||| |||||||
Sbjct: 2348 agagtgataagaagaaagaggaggttcaaaggcaagtgttgcagaatgaattcttgaaaa 2407
Query: 335 gtgttaaggaaatgagtaagagtgtggtgaagaatgaaaatgataagagtggtatatgag 394
||||||||||||| ||||||||| ||||||||||| |||||||||||||| ||||| |
Sbjct: 2408 gtgttaaggaaatcagtaagagtctggtgaagaatcaaaatgataagagtcctatatcac 2467
Query: 395 aattaaattgggatgagatgtaggaggtttgtggagaattaatggatgaatagagtaagg 454
|||||||||||||| ||||||| || |||| || ||||||||||||| |||| |||||||
Sbjct: 2468 aattaaattgggatcagatgtacgacgtttctgcagaattaatggatcaatacagtaagg 2527
Query: 455 agatggaagagatgttaggtgaagttgatgaggtatatragarggatttgatgtgggaag 514
|||||||| |||| |||| |||| |||||||||||||| ||| | |||| |||||| |||
Sbjct: 2528 agatggaacagatcttagctgaacttgatgaggtatataagaagcatttcatgtggcaag 2587
Query: 515 aggggggatttagtattgattgagatagaggtgggaggagaatagggaatggtgaratgt 574
||| || ||||| |||||||| | ||||||||| | |||||||| |||| ||| ||||
Sbjct: 2588 aggcggcatttactattgattcacatagaggtgccacgagaatagccaatgctgaaatgt 2647
Query: 575 ggatgaratgtaaagaaggatagttagaatagagaagaraagaagtggatagttagggaa 634
|||||| || |||||||| ||| ||| |||| | |||| ||||| | |||| || || ||
Sbjct: 2648 ggatgaaatctaaagaagcatacttacaatacacaagaaaagaactcgatacttcggcaa 2707
Query: 635 aagtgattaaraggaagatagaagakgtttggaagagatgaaagtsattattttgctacc 694
|||| ||||| | | |||||||| ||| ||||||||||||| ||||||||||||||
Sbjct: 2708 aagtcattaaaaccaccatagaagatctttccaagagatgaaagtcattattttgctacc 2767
Query: 695 ctttgttgtctgtsccaacgcattcgatcaataatcatcagcgccaggcataccttcaaa 754
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2768 ctttgttgtctgtcccaacgcattcgatcaataatcatcagcgccaggcataccttcaaa 2827
Query: 755 aatctgaccatacattcggaatctcsatccacaaaatgagattacgaatcatccgggttc 814
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2828 aatctgaccatacattcggaatctcgatccacaaaatgagattacgaatcatccgggttc 2887
Query: 815 aaggcaataacacagaagaaacgaaamggcatcatgcaga 854
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 2888 aaggcaataacacagaagaaacgaaacggcatcatgcaga 2927
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6302
Number of Sequences: 1807
Number of extensions: 6302
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 854
length of database: 10,358,551
effective HSP length: 16
effective length of query: 838
effective length of database: 10,329,639
effective search space: 8656237482
effective search space used: 8656237482
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)